- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.37 Å
- Oligo State
- monomer
- Ligands
- 1 x TTP: THYMIDINE-5'-TRIPHOSPHATE(Non-covalent)
- 8 x CA: CALCIUM ION(Non-covalent)
CA.2: 5 residues within 4Å:- Chain A: D.411, L.412, D.623
- Ligands: TTP.1, CA.3
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:D.411, A:D.411, A:L.412, A:D.623
CA.3: 5 residues within 4Å:- Chain A: D.411, D.623
- Chain C: C.14
- Ligands: TTP.1, CA.2
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:D.411, A:D.623, H2O.13, H2O.20
CA.4: 2 residues within 4Å:- Chain A: D.114, E.116
5 PLIP interactions:2 interactions with chain A, 3 Ligand-Water interactions- Metal complexes: A:E.116, A:E.116, H2O.3, H2O.12, H2O.12
CA.5: 2 residues within 4Å:- Chain A: E.660, D.684
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:E.660, A:D.684, H2O.10, H2O.14
CA.6: 3 residues within 4Å:- Chain A: N.505, N.507, K.531
5 PLIP interactions:1 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: A:K.531, H2O.12, H2O.12, H2O.12, H2O.14
CA.7: 2 residues within 4Å:- Chain A: D.192, E.196
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:D.192, A:D.192, A:E.196, A:E.196
CA.8: 2 residues within 4Å:- Chain A: E.172, E.177
3 PLIP interactions:2 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:E.172, A:E.177, H2O.12
CA.10: 4 residues within 4Å:- Chain A: D.411, E.686, E.716
- Ligands: TTP.1
3 PLIP interactions:2 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:D.411, A:E.686, H2O.18
- 2 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Clausen, A.R. et al., Structure-function analysis of ribonucleotide bypass by B family DNA replicases. Proc.Natl.Acad.Sci.USA (2013)
- Release Date
- 2013-10-09
- Peptides
- DNA polymerase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.37 Å
- Oligo State
- monomer
- Ligands
- 1 x TTP: THYMIDINE-5'-TRIPHOSPHATE(Non-covalent)
- 8 x CA: CALCIUM ION(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Clausen, A.R. et al., Structure-function analysis of ribonucleotide bypass by B family DNA replicases. Proc.Natl.Acad.Sci.USA (2013)
- Release Date
- 2013-10-09
- Peptides
- DNA polymerase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A