SMTL ID : 4kit.1

Crystal structure of human Brr2 in complex with the Prp8 Jab1/MPN domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.60 Å

Oligo State

hetero-1-1-mer

Ligands

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 11 residues within 4Å: Chain A: T.90, N.92, Q.95, G.116, A.117, G.118, K.119, T.120, D.225, E.226, N.430 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:N.92, A:Q.95, A:Q.95, A:G.116, A:G.118, A:K.119, A:T.120, A:D.225, A:E.226, A:N.430 Salt bridges: A:K.119, A:K.119 ADP.2: 14 residues within 4Å: Chain A: F.935, F.937, F.938, Q.942, T.962, G.963, S.964, G.965, K.966, T.967, I.968, E.1065, P.1304 Ligands: MG.3 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:F.937, A:N.939, A:Q.942, A:G.963, A:S.964, A:G.965, A:K.966, A:T.967 Salt bridges: A:K.966, A:K.966 pi-Stacking: A:F.935

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 4 residues within 4Å: Chain A: T.967, D.1064, E.1065 Ligands: ADP.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.1064

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mozaffari-Jovin, S. et al., Inhibition of RNA helicase Brr2 by the C-terminal tail of the spliceosomal protein Prp8. Science (2013)

Release Date

2013-06-05

Peptides

U5 small nuclear ribonucleoprotein 200 kDa helicase: A
Pre-mRNA-processing-splicing factor 8: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

U5 small nuclear ribonucleoprotein 200 kDa helicase

Pre-mRNA-processing-splicing factor 8

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