SMTL ID : 4kjd.1

RatIntestinal AP expressed in E. coli

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.21 Å

Oligo State

homo-dimer

Ligands

4 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: D.42, H.153, S.155, E.311 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:S.155, A:E.311, H2O.6, H2O.6, H2O.6 MG.2: 4 residues within 4Å: Chain A: E.216, F.269, E.270, D.285 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.216, A:F.269, A:E.270, A:D.285, H2O.2 MG.4: 3 residues within 4Å: Chain B: H.153, S.155, E.311 6 PLIP interactions: 2 interactions with chain B, 4 Ligand-Water interactions Metal complexes: B:S.155, B:E.311, H2O.10, H2O.11, H2O.11, H2O.11 MG.5: 4 residues within 4Å: Chain B: E.216, F.269, E.270, D.285 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.216, B:F.269, B:E.270, B:D.285, H2O.6

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 7 residues within 4Å: Chain A: K.34, N.35, S.300, T.345, N.346, D.349, T.350 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:K.34, A:K.34, A:N.35, A:S.300, A:N.346, A:N.346, A:T.350 GOL.6: 7 residues within 4Å: Chain B: K.34, N.35, S.300, T.345, N.346, D.349, T.350 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:K.34, B:N.35, B:S.300, B:N.346, B:N.346, B:D.349, B:T.350

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ghosh, K. et al., Crystal structure of rat intestinal alkaline phosphatase - Role of crown domain in mammalian alkaline phosphatases. J.Struct.Biol. (2013)

Release Date

2013-10-16

Peptides

Intestinal-type alkaline phosphatase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Intestinal-type alkaline phosphatase 1

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