SMTL ID : 4klz.1

Inhibition of Small GTPases by Stabilization of the GDP Complex, a Novel Approach applied to Rit1, a Target for Rheumatoid Arthritis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 18 residues within 4Å: Chain A: A.13, G.14, G.15, V.16, G.17, K.18, S.19, A.20, F.30, E.32, N.118, K.119, D.121, L.122, S.148, A.149, A.150 Ligands: MG.2 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:G.15, A:V.16, A:G.17, A:K.18, A:S.19, A:A.20, A:E.32, A:N.118, A:K.119, A:K.119, A:S.148, A:A.150 Salt bridges: A:K.18, A:D.121 pi-Stacking: A:F.30

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: S.19, H.34 Ligands: GDP.1 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:S.19, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shah, D.M. et al., Inhibition of Small GTPases by Stabilization of the GDP Complex, a Novel Approach applied to Rit1, a Target for Rheumatoid Arthritis. To be Published

Release Date

2014-09-17

Peptides

GTP-binding protein Rit1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GTP-binding protein Rit1