SMTL ID : 4kmd.2 (1 other biounit)

Crystal structure of Sufud60-Gli1p

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-2-2-mer

Ligands

12 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: E.327, P.383, Y.384, K.427, K.428 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.327 Water bridges: A:L.326, A:Y.384, A:Y.384 GOL.2: 7 residues within 4Å: Chain A: F.136, G.137, F.138, T.174, F.175, T.216 Ligands: DTT.7 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.174, A:F.175, A:T.216 Water bridges: A:G.137, A:S.177 GOL.3: 4 residues within 4Å: Chain A: H.125, G.135, F.136 Chain C: E.327 5 PLIP interactions: 1 interactions with chain C, 4 interactions with chain A Water bridges: C:E.327, A:E.126, A:E.126, A:E.126 Hydrogen bonds: A:H.125 GOL.4: 2 residues within 4Å: Chain A: I.77, K.79 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.79 GOL.5: 6 residues within 4Å: Chain A: Y.58, R.62, Q.68, P.69, P.71, Y.94 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:P.69, A:Y.94 GOL.6: 2 residues within 4Å: Chain A: L.49, F.50 No protein-ligand interaction detected (PLIP) GOL.8: 5 residues within 4Å: Chain C: E.327, P.383, Y.384, K.427, K.428 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:E.327 Water bridges: C:L.326, C:Y.384, C:Y.384 GOL.9: 7 residues within 4Å: Chain C: F.136, G.137, F.138, T.174, F.175, T.216 Ligands: DTT.14 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:F.175 Water bridges: C:G.137, C:S.177 GOL.10: 4 residues within 4Å: Chain A: E.327 Chain C: H.125, G.135, F.136 5 PLIP interactions: 4 interactions with chain C, 1 interactions with chain A Hydrogen bonds: C:H.125 Water bridges: C:E.126, C:E.126, C:E.126, A:E.327 GOL.11: 2 residues within 4Å: Chain C: I.77, K.79 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:K.79 Water bridges: C:T.75 GOL.12: 6 residues within 4Å: Chain C: Y.58, R.62, Q.68, P.69, P.71, Y.94 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:P.69, C:Y.94, C:Y.94 GOL.13: 2 residues within 4Å: Chain C: L.49, F.50 No protein-ligand interaction detected (PLIP)

2 x DTT: 2,3-DIHYDROXY-1,4-DITHIOBUTANE(Non-covalent)

DTT.7: 3 residues within 4Å: Chain A: F.175, C.176 Ligands: GOL.2 1 PLIP interactions: 1 interactions with chain A Water bridges: A:S.177 DTT.14: 3 residues within 4Å: Chain C: F.175, C.176 Ligands: GOL.9 1 PLIP interactions: 1 interactions with chain C Water bridges: C:S.177

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Structural insight into the mutual recognition and regulation between Suppressor of Fused and Gli/Ci. Nat Commun (2013)

Release Date

2013-11-20

Peptides

Sufu: AC
Zinc finger protein GLI1: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B

Sufu

Zinc finger protein GLI1

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