- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-hexamer
- Ligands
- 18 x PO4: PHOSPHATE ION(Non-functional Binders)
- 6 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.4: 7 residues within 4Å:- Chain A: R.88, R.94, N.128, Y.130, E.149
- Chain C: H.248, R.276
9 PLIP interactions:8 interactions with chain A, 1 interactions with chain C- Hydrophobic interactions: A:Y.130
- Hydrogen bonds: A:R.88, A:R.94, A:R.94, A:N.128, A:E.149, A:D.344
- Water bridges: A:R.88, C:R.276
MPD.8: 7 residues within 4Å:- Chain B: R.88, R.94, N.128, Y.130, E.149
- Chain F: H.248, R.276
8 PLIP interactions:7 interactions with chain B, 1 interactions with chain F- Hydrophobic interactions: B:Y.130
- Hydrogen bonds: B:R.88, B:R.94, B:R.94, B:N.128, B:E.149
- Water bridges: B:D.344, F:R.276
MPD.12: 7 residues within 4Å:- Chain C: R.88, R.94, N.128, Y.130, E.149
- Chain E: H.248, R.276
9 PLIP interactions:8 interactions with chain C, 1 interactions with chain E- Hydrophobic interactions: C:Y.130
- Hydrogen bonds: C:R.88, C:R.94, C:R.94, C:N.128, C:E.149, C:D.344
- Water bridges: C:R.88, E:R.276
MPD.16: 7 residues within 4Å:- Chain B: H.248, R.276
- Chain D: R.88, R.94, N.128, Y.130, E.149
8 PLIP interactions:7 interactions with chain D, 1 interactions with chain B- Hydrophobic interactions: D:Y.130
- Hydrogen bonds: D:R.88, D:R.94, D:R.94, D:N.128, D:E.149
- Water bridges: D:D.344, B:R.276
MPD.20: 7 residues within 4Å:- Chain A: H.248, R.276
- Chain E: R.88, R.94, N.128, Y.130, E.149
9 PLIP interactions:8 interactions with chain E, 1 interactions with chain A- Hydrophobic interactions: E:Y.130
- Hydrogen bonds: E:R.88, E:R.94, E:R.94, E:N.128, E:E.149, E:D.344
- Water bridges: E:R.88, A:R.276
MPD.24: 7 residues within 4Å:- Chain D: H.248, R.276
- Chain F: R.88, R.94, N.128, Y.130, E.149
8 PLIP interactions:7 interactions with chain F, 1 interactions with chain D- Hydrophobic interactions: F:Y.130
- Hydrogen bonds: F:R.88, F:R.94, F:R.94, F:N.128, F:E.149
- Water bridges: F:D.344, D:R.276
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nakae, S. et al., Structure of Novel Enzyme in Mannan Biodegradation Process 4-O-beta-d-Mannosyl-d-Glucose Phosphorylase MGP. J.Mol.Biol. (2013)
- Release Date
- 2013-09-04
- Peptides
- 4-O-beta-D-mannosyl-D-glucose phosphorylase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-hexamer
- Ligands
- 18 x PO4: PHOSPHATE ION(Non-functional Binders)
- 6 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nakae, S. et al., Structure of Novel Enzyme in Mannan Biodegradation Process 4-O-beta-d-Mannosyl-d-Glucose Phosphorylase MGP. J.Mol.Biol. (2013)
- Release Date
- 2013-09-04
- Peptides
- 4-O-beta-D-mannosyl-D-glucose phosphorylase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
B