SMTL ID : 4kpa.1

Crystal structure of cytochrome P450 BM-3 in complex with N-palmitoylglycine (NPG)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 24 residues within 4Å: Chain A: K.93, L.99, L.110, F.111, W.120, F.131, I.177, F.285, A.288, G.289, T.292, T.293, L.296, T.351, F.355, P.416, F.417, G.418, R.422, A.423, C.424, I.425, G.426, A.430 24 PLIP interactions: 24 interactions with chain A, Hydrophobic interactions: A:L.110, A:F.111, A:F.111, A:F.111, A:F.131, A:I.177, A:F.285, A:F.285, A:A.288, A:L.296, A:F.417, A:I.425, A:A.430 Hydrogen bonds: A:R.422, A:R.422 Water bridges: A:K.93, A:K.93, A:S.96, A:S.356, A:S.356, A:S.356 Salt bridges: A:K.93, A:R.422 Metal complexes: A:C.424

1 x 140: N-PALMITOYLGLYCINE(Non-covalent)

140.2: 15 residues within 4Å: Chain A: L.44, P.49, V.50, R.71, Y.75, A.98, L.99, V.102, A.106, F.111, L.212, I.287, A.354, L.461, T.462 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:A.98, A:L.99, A:A.106, A:F.111 Hydrogen bonds: A:Y.75, A:Y.75 Water bridges: A:L.212 Salt bridges: A:R.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Catalano, J. et al., Structural Evidence: A Single Charged Residue Affects Substrate Binding in Cytochrome P450 BM-3. Biochemistry (2013)

Release Date

2013-07-24

Peptides

Cytochrome P450 BM-3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome P450 BM-3