SMTL ID : 4ksj.1

Crystal structure of the OTU domain of Gumby/Fam105B at 1.6 angstrom

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.1: 5 residues within 4Å: Chain A: M.13, C.16, K.17, K.31, E.35 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.35

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: W.91, D.192, P.193, G.194, Q.195, R.198 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.192, A:G.194, A:Q.195, A:R.198, A:R.198 GOL.3: 6 residues within 4Å: Chain A: H.200, Q.203, G.208, G.209, E.211, E.214 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.200, A:E.214

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rivkin, E. et al., The linear ubiquitin-specific deubiquitinase gumby regulates angiogenesis. Nature (2013)

Release Date

2013-06-05

Peptides

Protein FAM105B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein FAM105B