SMTL ID : 4kxf.11 (10 other biounits)

Crystal structure of NLRC4 reveals its autoinhibition mechanism

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-tetramer

Ligands

4 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 18 residues within 4Å: Chain A: P.119, F.128, T.133, F.134, T.135, S.171, G.172, K.173, G.174, K.175, S.176, T.177, M.300, L.308, P.338, L.339, V.342, H.443 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:T.135, A:T.135, A:G.172, A:K.173, A:G.174, A:K.175, A:S.176, A:T.177, A:T.177 Salt bridges: A:K.175, A:H.443, A:H.443 ADP.2: 19 residues within 4Å: Chain B: F.117, P.119, F.128, T.133, F.134, T.135, S.171, G.172, K.173, G.174, K.175, S.176, T.177, M.300, L.308, P.338, L.339, V.342, H.443 13 PLIP interactions: 13 interactions with chain B Hydrogen bonds: B:T.135, B:T.135, B:G.172, B:K.173, B:G.174, B:G.174, B:K.175, B:S.176, B:T.177, B:T.177 Salt bridges: B:K.175, B:H.443, B:H.443 ADP.4: 18 residues within 4Å: Chain C: P.119, F.128, T.133, F.134, T.135, S.171, G.172, K.173, G.174, K.175, S.176, T.177, M.300, L.308, P.338, L.339, V.342, H.443 13 PLIP interactions: 13 interactions with chain C Hydrogen bonds: C:T.135, C:T.135, C:T.135, C:G.172, C:K.173, C:G.174, C:K.175, C:S.176, C:T.177, C:T.177 Salt bridges: C:K.175, C:H.443, C:H.443 ADP.5: 19 residues within 4Å: Chain D: F.117, P.119, F.128, T.133, F.134, T.135, S.171, G.172, K.173, G.174, K.175, S.176, T.177, M.300, L.308, P.338, L.339, V.342, H.443 14 PLIP interactions: 14 interactions with chain D Hydrogen bonds: D:T.135, D:T.135, D:T.135, D:G.172, D:K.173, D:G.174, D:G.174, D:K.175, D:S.176, D:T.177, D:T.177 Salt bridges: D:K.175, D:H.443, D:H.443

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 1 residues within 4Å: Chain B: E.542 No protein-ligand interaction detected (PLIP) SO4.6: 1 residues within 4Å: Chain D: E.542 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hu, Z. et al., Crystal structure of NLRC4 reveals its autoinhibition mechanism. Science (2013)

Release Date

2013-07-24

Peptides

NLR family CARD domain-containing protein 4: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
N

C
D

D
N

NLR family CARD domain-containing protein 4

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