SMTL ID : 4kxj.1

Crystal structure of HCoV-OC43 N-NTD complexed with PJ34

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

monomer

Ligands

1 x P34: N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6-DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE(Non-covalent)

P34.1: 10 residues within 4Å: Chain A: F.2, P.6, Y.7, Y.8, S.9, Y.47, H.49, N.50, Y.69, Y.71 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.2, A:F.2, A:P.6, A:P.6, A:Y.47, A:Y.69 Hydrogen bonds: A:S.9, A:Y.71, A:R.109 Water bridges: A:N.50 pi-Stacking: A:Y.8, A:Y.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, S.Y. et al., Structural basis for the identification of the N-terminal domain of coronavirus nucleocapsid protein as an antiviral target. J.Med.Chem. (2014)

Release Date

2014-05-28

Peptides

Nucleoprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nucleoprotein

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