SMTL ID : 4l05.1

Cu/Zn superoxide dismutase from Brucella abortus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.10 Å

Oligo State

monomer

Ligands

1 x CU1: COPPER (I) ION(Non-covalent)

CU1.1: 6 residues within 4Å: Chain A: H.48, H.50, H.73, M.126, H.128 Ligands: CU.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.48, A:H.50, A:H.128, H2O.11

1 x CU: COPPER (II) ION(Non-covalent)

CU.2: 6 residues within 4Å: Chain A: H.48, H.50, H.73, M.126, H.128 Ligands: CU1.1 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.48, A:H.50, A:H.73, A:H.128, H2O.11

1 x ZN: ZINC ION(Non-covalent)

ZN.3: 4 residues within 4Å: Chain A: H.73, H.82, H.90, D.93 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.73, A:H.82, A:H.90, A:D.93, A:D.93

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 4 residues within 4Å: Chain A: E.51, Y.74, P.76, R.123 5 PLIP interactions: 5 interactions with chain A Water bridges: A:E.51, A:D.75, A:R.123, A:R.123 Salt bridges: A:R.123

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 2 residues within 4Å: Chain A: T.3, T.4 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.3, A:T.4, A:T.4, A:T.4 Water bridges: A:S.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pratt, A.J. et al., Structural, Functional, and Immunogenic Insights on Cu,Zn Superoxide Dismutase Pathogenic Virulence Factors from Neisseria meningitidis and Brucella abortus. J.Bacteriol. (2015)

Release Date

2013-10-23

Peptides

Superoxide dismutase [Cu-Zn]: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Superoxide dismutase [Cu-Zn]