SMTL ID : 4l0j.1 (1 other biounit)

Structure of a translocation signal domain mediating conjugative transfer by type IV secretion systems

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: R.47, R.50, Y.51, E.77, S.256, A.257 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.257 Water bridges: A:R.50, A:D.255 Salt bridges: A:R.50

4 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 6 residues within 4Å: Chain A: T.103, A.104, S.232, A.238, L.239 Ligands: MG.3 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:T.103 MG.3: 6 residues within 4Å: Chain A: M.102, P.230, V.231, S.232, L.239 Ligands: MG.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:P.230 MG.4: 5 residues within 4Å: Chain A: K.194, I.195, P.196, L.239, K.240 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:K.194, H2O.3 MG.5: 3 residues within 4Å: Chain A: D.214, P.230, V.231 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.214

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Redzej, A. et al., Structure of a translocation signal domain mediating conjugative transfer by type IV secretion systems. Mol.Microbiol. (2013)

Release Date

2013-06-19

Peptides

DNA helicase I: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA helicase I

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