SMTL ID : 4l1j.1

Three dimensional structure of mutant D143A of human HD domain-containing protein 2, Northeast Structural Genomics Consortium (NESG) Target HR6723

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.82 Å

Oligo State

hetero-1-1-mer

Ligands

6 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 4 residues within 4Å: Chain A: N.39, E.158, K.160, R.163 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.160 PEG.2: 6 residues within 4Å: Chain A: Q.26, R.29, V.30, C.82, I.83, G.85 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.29 PEG.3: 3 residues within 4Å: Chain A: M.147, F.167, S.170 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.170 PEG.4: 4 residues within 4Å: Chain B: N.39, E.158, K.160, R.163 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:E.158, B:K.160 PEG.5: 5 residues within 4Å: Chain A: D.68 Chain B: D.68, R.69, R.72, E.120 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:D.68, B:R.69, B:E.120, B:E.120 PEG.6: 7 residues within 4Å: Chain B: R.29, V.30, E.81, C.82, I.83, V.84, G.85 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.29 Water bridges: B:R.29

1 x PE4: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL(Non-functional Binders)

PE4.7: 7 residues within 4Å: Chain B: R.32, G.34, W.35, P.89, M.147, F.167, S.170 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:G.34, B:W.35, B:W.35

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kuzin, A. et al., Three dimensional structure of mutant D143A of human HD domain-containing protein 2, Northeast Structural Genomics Consortium (NESG) Target HR6723. To be Published

Release Date

2013-06-19

Peptides

HD domain-containing protein 2: A
HD domain-containing protein 2 (Phosphorylate): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HD domain-containing protein 2

HD domain-containing protein 2 (Phosphorylate)