SMTL ID : 4l1u.5 (5 other biounits)

Crystal Structure of Human Rtf1 Plus3 Domain in Complex with Spt5 CTR Phosphopeptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.42 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 11 residues within 4Å: Chain A: I.43, I.45, R.55, A.57, L.82, R.83, H.84, D.87, Q.88, R.89, F.91 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:L.82, A:H.84, A:R.89 Salt bridges: A:R.55 SO4.2: 6 residues within 4Å: Chain A: R.20, R.42, Y.54, S.97, N.98, Q.99 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.42, A:S.97, A:N.98, A:Q.99, A:Q.99 Water bridges: A:N.98 Salt bridges: A:R.20 SO4.3: 3 residues within 4Å: Chain A: V.68, Y.69, Q.70 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.70, A:Q.70

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 5 residues within 4Å: Chain A: R.17, S.19, H.21, K.22, N.98 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.17, A:S.19, A:S.19, A:K.22

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wier, A.D. et al., Structural basis for Spt5-mediated recruitment of the Paf1 complex to chromatin. Proc.Natl.Acad.Sci.USA (2013)

Release Date

2013-10-02

Peptides

RNA polymerase-associated protein RTF1 homolog: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RNA polymerase-associated protein RTF1 homolog

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