SMTL ID : 4l4g.1

Structure of cyanide and camphor bound P450cam mutant L358P/K178G

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 27 residues within 4Å: Chain A: P.101, T.102, Q.109, R.113, V.120, F.164, L.245, L.246, G.249, T.253, V.254, F.257, L.295, V.296, D.298, R.300, Q.323, T.350, F.351, G.352, H.356, C.358, P.359, G.360, A.364 Ligands: CYN.2, CAM.3 21 PLIP interactions: 21 interactions with chain A, Hydrophobic interactions: A:V.120, A:F.164, A:L.246, A:T.253, A:F.257, A:L.295, A:V.296, A:Q.323, A:T.350, A:F.351, A:P.359 Hydrogen bonds: A:T.102, A:Q.109, A:D.298, A:Q.323 Salt bridges: A:R.113, A:R.300, A:H.356, A:H.356 pi-Stacking: A:F.351 Metal complexes: A:C.358

1 x CYN: CYANIDE ION(Non-covalent)

CYN.2: 4 residues within 4Å: Chain A: G.249, T.253 Ligands: HEM.1, CAM.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.253 Water bridges: A:G.249, A:T.253

1 x CAM: CAMPHOR(Non-covalent)

CAM.3: 9 residues within 4Å: Chain A: F.88, Y.97, T.102, L.245, V.248, V.296, D.298 Ligands: HEM.1, CYN.2 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:T.102

3 x K: POTASSIUM ION(Non-covalent)

K.4: 4 residues within 4Å: Chain A: E.85, G.94, E.95, Y.97 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.85, A:G.94, A:E.95, A:Y.97, H2O.2, H2O.7 K.5: 4 residues within 4Å: Chain A: L.15, P.16, P.17, V.19 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:P.16, A:P.17, A:V.19, H2O.6 K.6: 5 residues within 4Å: Chain A: G.179, T.182, D.183, L.251, D.252 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:T.182, A:D.183, A:D.252, H2O.10

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Batabyal, D. et al., Synergistic Effects of Mutations in Cytochrome P450cam Designed To Mimic CYP101D1. Biochemistry (2013)

Release Date

2013-07-31

Peptides

Camphor 5-monooxygenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Camphor 5-monooxygenase

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