SMTL ID : 4l85.1 (1 other biounit)

Crystal structure of receiver domain of KdpE D52A mutant from E. coli

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

23 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 3 residues within 4Å: Chain A: R.17, R.20, E.32 Ligand excluded by PLIP IOD.2: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.3: 6 residues within 4Å: Chain A: L.101, S.102, P.104, F.105, G.106, E.109 Ligand excluded by PLIP IOD.4: 1 residues within 4Å: Chain B: L.41 Ligand excluded by PLIP IOD.5: 4 residues within 4Å: Chain A: L.55, G.62, I.63, A.92 Ligand excluded by PLIP IOD.6: 2 residues within 4Å: Chain A: I.63, R.83 Ligand excluded by PLIP IOD.7: 2 residues within 4Å: Chain A: F.31, E.32 Ligand excluded by PLIP IOD.8: 1 residues within 4Å: Chain A: Q.111 Ligand excluded by PLIP IOD.9: 2 residues within 4Å: Chain A: A.82 Chain B: Q.71 Ligand excluded by PLIP IOD.10: 6 residues within 4Å: Chain B: G.56, L.80, S.81, A.82, K.103 Ligands: IOD.21 Ligand excluded by PLIP IOD.11: 4 residues within 4Å: Chain B: Q.37, R.38, L.41 Ligands: IOD.19 Ligand excluded by PLIP IOD.12: 1 residues within 4Å: Ligands: IOD.20 Ligand excluded by PLIP IOD.13: 1 residues within 4Å: Chain B: G.96 Ligand excluded by PLIP IOD.14: 3 residues within 4Å: Chain B: E.42, T.45, R.46 Ligand excluded by PLIP IOD.15: 3 residues within 4Å: Chain B: L.55, D.59, I.63 Ligand excluded by PLIP IOD.16: 2 residues within 4Å: Chain B: R.46 Ligands: IOD.17 Ligand excluded by PLIP IOD.17: 4 residues within 4Å: Chain B: F.31, R.46, P.48 Ligands: IOD.16 Ligand excluded by PLIP IOD.18: 1 residues within 4Å: Chain B: A.22 Ligand excluded by PLIP IOD.19: 3 residues within 4Å: Chain A: T.21 Chain B: Q.37 Ligands: IOD.11 Ligand excluded by PLIP IOD.20: 3 residues within 4Å: Chain B: R.17, F.18 Ligands: IOD.12 Ligand excluded by PLIP IOD.21: 2 residues within 4Å: Chain B: K.103 Ligands: IOD.10 Ligand excluded by PLIP IOD.22: 3 residues within 4Å: Chain B: D.26, M.28, R.115 Ligand excluded by PLIP IOD.23: 1 residues within 4Å: Chain B: R.119 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Narayanan, A. et al., An asymmetric heterodomain interface stabilizes a response regulator-DNA complex. Nat Commun (2014)

Release Date

2014-02-19

Peptides

KDP operon transcriptional regulatory protein KdpE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

KDP operon transcriptional regulatory protein KdpE

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