SMTL ID : 4l9b.1

Structure of native RBP from lactococcal phage 1358 (CsI derivative)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-trimer

Ligands

18 x CS: CESIUM ION(Non-covalent)(Non-functional Binders)

CS.1: 2 residues within 4Å: Chain A: S.45, Q.81 Ligand excluded by PLIP CS.2: 3 residues within 4Å: Chain A: G.80, S.82, E.84 Ligand excluded by PLIP CS.3: 1 residues within 4Å: Chain A: Y.164 Ligand excluded by PLIP CS.4: 2 residues within 4Å: Chain A: S.233, Q.234 Ligand excluded by PLIP CS.5: 8 residues within 4Å: Chain A: R.254, D.256 Chain B: R.254, D.256 Chain C: R.254, D.256 Ligands: CS.11, CS.17 Ligand excluded by PLIP CS.6: 2 residues within 4Å: Ligands: CS.12, CS.18 Ligand excluded by PLIP CS.7: 2 residues within 4Å: Chain B: S.45, Q.81 Ligand excluded by PLIP CS.8: 3 residues within 4Å: Chain B: G.80, S.82, E.84 Ligand excluded by PLIP CS.9: 1 residues within 4Å: Chain B: Y.164 Ligand excluded by PLIP CS.10: 2 residues within 4Å: Chain B: S.233, Q.234 Ligand excluded by PLIP CS.11: 8 residues within 4Å: Chain A: R.254, D.256 Chain B: R.254, D.256 Chain C: R.254, D.256 Ligands: CS.5, CS.17 Ligand excluded by PLIP CS.12: 2 residues within 4Å: Ligands: CS.6, CS.18 Ligand excluded by PLIP CS.13: 2 residues within 4Å: Chain C: S.45, Q.81 Ligand excluded by PLIP CS.14: 3 residues within 4Å: Chain C: G.80, S.82, E.84 Ligand excluded by PLIP CS.15: 1 residues within 4Å: Chain C: Y.164 Ligand excluded by PLIP CS.16: 2 residues within 4Å: Chain C: S.233, Q.234 Ligand excluded by PLIP CS.17: 8 residues within 4Å: Chain A: R.254, D.256 Chain B: R.254, D.256 Chain C: R.254, D.256 Ligands: CS.5, CS.11 Ligand excluded by PLIP CS.18: 2 residues within 4Å: Ligands: CS.6, CS.12 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Farenc, C. et al., A Virulent Siphophage CyoEM Structure and Host Recognition and Infection Mechanism. To be Published

Release Date

2014-04-30

Peptides

Receptor Binding Protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Receptor Binding Protein

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