- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x MG: MAGNESIUM ION(Non-covalent)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.2: 5 residues within 4Å:- Chain A: G.186, A.187, A.188, D.189, P.244
Ligand excluded by PLIPCL.7: 5 residues within 4Å:- Chain C: G.186, A.187, A.188, D.189, P.244
Ligand excluded by PLIPCL.11: 5 residues within 4Å:- Chain E: G.186, A.187, A.188, D.189, P.244
Ligand excluded by PLIPCL.13: 5 residues within 4Å:- Chain F: G.186, A.187, A.188, D.189, P.244
Ligand excluded by PLIP- 1 x 1VU: propionyl Coenzyme A(Non-covalent)
1VU.3: 22 residues within 4Å:- Chain A: V.313, L.318, D.320
- Chain B: F.40, G.41, P.42, R.45, L.48, K.51, M.52, D.63, S.67, R.97, A.188, I.201, P.244, W.270, I.272, H.273, P.274
- Ligands: GLV.4, MG.5
13 PLIP interactions:12 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:A.188, B:I.201, B:P.244, A:L.318
- Hydrogen bonds: B:F.40, B:K.51, B:S.67, B:R.97, B:R.97, B:I.272
- Salt bridges: B:R.45, B:K.51, B:H.273
- 2 x GLV: GLYOXYLIC ACID(Non-covalent)
GLV.4: 10 residues within 4Å:- Chain B: R.97, E.162, G.186, A.187, A.188, D.189, P.244, W.270
- Ligands: 1VU.3, MG.5
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:R.97, B:E.162, B:A.188, B:D.189
GLV.8: 9 residues within 4Å:- Chain D: R.97, E.162, G.186, A.187, A.188, D.189, P.244, W.270
- Ligands: MG.9
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:R.97, D:A.188, D:D.189, D:D.189
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zarzycki, J. et al., The crystal structures of the tri-functional Chloroflexus aurantiacus and bi-functional Rhodobacter sphaeroides malyl-CoA lyases and comparison with CitE-like superfamily enzymes and malate synthases. Bmc Struct.Biol. (2013)
- Release Date
- 2013-12-04
- Peptides
- Malyl-CoA lyase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x MG: MAGNESIUM ION(Non-covalent)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
- 1 x 1VU: propionyl Coenzyme A(Non-covalent)
- 2 x GLV: GLYOXYLIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zarzycki, J. et al., The crystal structures of the tri-functional Chloroflexus aurantiacus and bi-functional Rhodobacter sphaeroides malyl-CoA lyases and comparison with CitE-like superfamily enzymes and malate synthases. Bmc Struct.Biol. (2013)
- Release Date
- 2013-12-04
- Peptides
- Malyl-CoA lyase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F