SMTL ID : 4lax.1

Crystal Structure Analysis of FKBP52, Complex with FK506

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

monomer

Ligands

1 x FK5: 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN(Non-covalent)

FK5.1: 14 residues within 4Å: Chain A: Y.66, F.76, D.77, F.86, E.94, V.95, I.96, W.99, A.121, Y.122, K.130, I.131, F.139 Ligands: DMS.2 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.66, A:F.86, A:F.86, A:F.86, A:W.99, A:W.99, A:W.99, A:I.131 Hydrogen bonds: A:Y.66, A:D.77, A:I.96, A:Y.122

3 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 5 residues within 4Å: Chain A: E.119, A.121, Y.122, G.123 Ligands: FK5.1 No protein-ligand interaction detected (PLIP) DMS.3: 2 residues within 4Å: Chain A: L.191, F.192 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Q.194 DMS.4: 7 residues within 4Å: Chain A: E.175, I.201, G.202, Y.211, E.214, R.215, Q.218 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.218 Salt bridges: A:E.175, A:E.214

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 3 residues within 4Å: Chain A: Y.187, K.190, Q.245 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.190

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bracher, A. et al., Crystal Structures of the Free and Ligand-Bound FK1-FK2 Domain Segment of FKBP52 Reveal a Flexible Inter-Domain Hinge. J.Mol.Biol. (2013)

Release Date

2013-08-21

Peptides

Peptidyl-prolyl cis-trans isomerase FKBP4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase FKBP4