SMTL ID : 4lbn.1

Crystal structure of Human galectin-3 CRD in complex with LNnT

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x GLC- GAL- NAG- GAL: beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose

GLC-GAL-NAG-GAL.1: 13 residues within 4Å: Chain A: P.6, R.33, A.35, D.37, H.47, N.49, R.51, V.61, N.63, W.70, E.73, R.75, S.126 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.51, A:R.51, A:R.75, A:R.33, A:D.37 Water bridges: A:E.54

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: V.114, K.115, K.116 Ligand excluded by PLIP CL.3: 5 residues within 4Å: Chain A: Q.39, R.40, G.41, E.119, S.121 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain A: F.52, R.58, E.82, S.83 Ligand excluded by PLIP CL.5: 4 residues within 4Å: Chain A: E.94, P.95, D.96, H.97 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Collins, P.M. et al., Galectin-3 interactions with glycosphingolipids. J.Mol.Biol. (2014)

Release Date

2014-01-22

Peptides

Galectin-3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Galectin-3

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