SMTL ID : 4ldk.1

FAD-linked sulfhydryl oxidase ALR mutation

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.04 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 23 residues within 4Å: Chain A: R.20, E.21, G.24, R.25, S.27, W.28, H.32, Y.61, C.66, D.69, L.70, C.92, H.95, N.96, V.98, N.99, K.101, L.102, K.104, F.107, R.115, W.116 Ligands: NA.2 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:W.28, A:W.28, A:W.28, A:L.70 Hydrogen bonds: A:R.20, A:W.28, A:W.28, A:C.92, A:N.99, A:K.101, A:K.104, A:R.115 Water bridges: A:E.21 Salt bridges: A:R.25, A:H.95, A:K.104 pi-Stacking: A:Y.61, A:H.95, A:F.107, A:F.107 FAD.3: 23 residues within 4Å: Chain B: R.20, E.21, G.24, R.25, S.27, W.28, H.32, Y.61, C.66, D.69, L.70, C.92, H.95, N.96, V.98, N.99, K.101, L.102, K.104, F.107, R.115, W.116 Ligands: NA.4 21 PLIP interactions: 21 interactions with chain B Hydrophobic interactions: B:W.28, B:W.28, B:W.28, B:L.70 Hydrogen bonds: B:R.20, B:W.28, B:W.28, B:D.69, B:C.92, B:H.95, B:N.99, B:K.101, B:K.104, B:R.115 Salt bridges: B:R.25, B:H.95, B:K.104 pi-Stacking: B:Y.61, B:H.95, B:F.107, B:F.107

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 5 residues within 4Å: Chain A: H.95, V.98, N.99, K.104 Ligands: FAD.1 No protein-ligand interaction detected (PLIP) NA.4: 5 residues within 4Å: Chain B: H.95, V.98, N.99, K.104 Ligands: FAD.3 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dong, M. et al., FAD-linked sulfhydryl oxidase ALR mutation. To be Published

Release Date

2014-07-16

Peptides

FAD-linked sulfhydryl oxidase ALR: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

FAD-linked sulfhydryl oxidase ALR