SMTL ID : 4lg7.1

Crystal structure MBD4 MBD domain in complex with methylated CpG DNA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

11 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.1: 3 residues within 4Å: Chain A: D.26, R.38 Chain C: C.6 No protein-ligand interaction detected (PLIP) UNX.2: 1 residues within 4Å: Chain A: R.38 No protein-ligand interaction detected (PLIP) UNX.3: 1 residues within 4Å: Chain A: R.11 No protein-ligand interaction detected (PLIP) UNX.4: 4 residues within 4Å: Chain B: G.7, T.8 Chain C: G.7, T.8 No protein-ligand interaction detected (PLIP) UNX.5: 5 residues within 4Å: Chain A: R.38, S.39 Chain B: A.4, A.5, C.6 No protein-ligand interaction detected (PLIP) UNX.6: 4 residues within 4Å: Chain B: G.1, C.2, C.3 Chain C: G.11 No protein-ligand interaction detected (PLIP) UNX.7: 3 residues within 4Å: Chain B: G.11 Chain C: G.1 Ligands: UNX.9 No protein-ligand interaction detected (PLIP) UNX.8: 3 residues within 4Å: Chain B: C.2 Chain C: G.10, G.11 No protein-ligand interaction detected (PLIP) UNX.9: 2 residues within 4Å: Chain C: G.1 Ligands: UNX.7 No protein-ligand interaction detected (PLIP) UNX.10: 1 residues within 4Å: Chain C: G.1 No protein-ligand interaction detected (PLIP) UNX.11: 1 residues within 4Å: Chain C: T.8 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, C. et al., Crystal structure MBD4 MBD domain in complex with methylated CpG DNA. To be Published

Release Date

2013-07-17

Peptides

Methyl-CpG-binding domain protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Methyl-CpG-binding domain protein 4