SMTL ID : 4lgp.1 (1 other biounit)

Ricin A chain bound to camelid nanobody (VHH1)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-oligomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 2 residues within 4Å: Chain A: G.120, N.122 Ligand excluded by PLIP

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: R.85, H.106, L.107, F.108, T.109, D.110 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.85, A:H.106, A:T.109, A:D.110, A:D.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rudolph, M.J. et al., Crystal Structures of Ricin Toxin's Enzymatic Subunit (RTA) in Complex with Neutralizing and Non-Neutralizing Single-Chain Antibodies. J.Mol.Biol. (2014)

Release Date

2014-06-11

Peptides

Ricin: A
VHH1 camelid nanobody: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ricin

VHH1 camelid nanobody

Related Entries With Identical Sequence