SMTL ID : 4lhy.2 (1 other biounit)

Crystal structure of GDP-bound Rab8:Rabin8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

hetero-1-2-mer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 16 residues within 4Å: Chain A: D.18, S.19, G.20, V.21, G.22, K.23, T.24, C.25, I.40, N.123, K.124, D.126, V.127, S.153, A.154, K.155 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:D.18, A:G.20, A:G.22, A:K.23, A:T.24, A:T.24, A:C.25, A:N.123, A:K.124, A:K.124, A:A.154, A:K.155, A:K.155 Salt bridges: A:K.23, A:D.126 pi-Cation interactions: A:K.124

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 1 residues within 4Å: Chain A: R.137 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.137

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guo, Z. et al., Intermediates in the Guanine Nucleotide Exchange Reaction of Rab8 Protein Catalyzed by Guanine Nucleotide Exchange Factors Rabin8 and GRAB. J.Biol.Chem. (2013)

Release Date

2013-10-09

Peptides

Ras-related protein Rab-8A: A
Rab-3A-interacting protein: BC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
D

Ras-related protein Rab-8A

Rab-3A-interacting protein

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