SMTL ID : 4lik.1

Crystal structure of the catalytic subunit of human primase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.125, C.126, I.131, C.132, C.135 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.125, A:C.126, A:C.132, A:C.135

3 x CIT: CITRIC ACID(Non-functional Binders)

CIT.2: 4 residues within 4Å: Chain A: S.164, R.166, K.322, H.328 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:S.164, A:K.322, A:H.328 Water bridges: A:R.166, A:K.322, A:K.322 Salt bridges: A:R.166, A:K.322, A:K.322, A:H.328, A:H.328, A:K.330 CIT.3: 5 residues within 4Å: Chain A: P.92, N.93, Q.94, H.95, N.96 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:H.95, A:N.96, A:N.96 Water bridges: A:Q.62, A:P.92, A:T.97, A:T.97 Salt bridges: A:H.95 CIT.4: 4 residues within 4Å: Chain A: K.151, E.152, G.155, K.157 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.152, A:K.157 Water bridges: A:K.151, A:E.152 Salt bridges: A:K.151, A:K.157

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vaithiyalingam, S. et al., Insights into Eukaryotic Primer Synthesis from Structures of the p48 Subunit of Human DNA Primase. J.Mol.Biol. (2014)

Release Date

2013-12-11

Peptides

DNA primase small subunit: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA primase small subunit

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