SMTL ID : 4lkl.1

Crystal structure of Plk1 Polo-box domain in complex with PL-55

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.58 Å

Oligo State

monomer

Ligands

1 x ACE- PRO- LEU- HIS- SER- TPO- MET- NH2: PL-55(Non-covalent)

ACE-PRO-LEU-HIS-SER-TPO-MET-NH2.1: 12 residues within 4Å: Chain A: K.42, W.43, V.44, D.45, Y.114, L.119, L.120, R.145, F.164, H.167, K.169 Ligands: ADM.2 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.164 Hydrogen bonds: A:W.43, A:W.43, A:D.45, A:L.120, A:R.145, A:R.145 Water bridges: A:S.41 Salt bridges: A:H.167, A:K.169

1 x ADM: ADAMANTANE(Non-covalent)

ADM.2: 3 residues within 4Å: Chain A: R.147 Ligands: ACE-PRO-LEU-HIS-SER-TPO-MET-NH2.1, ACE-PRO-LEU-HIS-SER-TPO-MET-NH2.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Murugan, R.N. et al., Exploring the binding nature of pyrrolidine pocket-dependent interactions in the polo-box domain of polo-like kinase 1. Plos One (2013)

Release Date

2013-12-11

Peptides

Serine/threonine-protein kinase PLK1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase PLK1