SMTL ID : 4lm4.3 (2 other biounits)

Crystal structure of PDE10A2 with fragment ZT902

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.48 Å

Oligo State

homo-dimer

Ligands

1 x JPZ: quinazolin-4(1H)-one(Non-covalent)

JPZ.1: 8 residues within 4Å: Chain A: Y.80, L.231, S.233, V.234, I.248, F.252, Q.282, F.285 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.231, A:V.234, A:I.248, A:F.285 Hydrogen bonds: A:Q.282, A:Q.282 pi-Stacking: A:F.285

4 x NI: NICKEL (II) ION(Non-covalent)

NI.2: 5 residues within 4Å: Chain A: H.85, H.119, D.120, D.230 Ligands: NI.3 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.85, A:H.119, A:D.120, A:D.230, H2O.8, H2O.8 NI.3: 2 residues within 4Å: Chain A: D.120 Ligands: NI.2 6 PLIP interactions: 1 interactions with chain A, 5 Ligand-Water interactions Metal complexes: A:D.120, H2O.8, H2O.8, H2O.8, H2O.8, H2O.8 NI.4: 5 residues within 4Å: Chain B: H.85, H.119, D.120, D.230 Ligands: NI.5 6 PLIP interactions: 4 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.85, B:H.119, B:D.120, B:D.230, H2O.15, H2O.15 NI.5: 2 residues within 4Å: Chain B: D.120 Ligands: NI.4 6 PLIP interactions: 1 interactions with chain B, 5 Ligand-Water interactions Metal complexes: B:D.120, H2O.10, H2O.11, H2O.15, H2O.15, H2O.15

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Recht, M.I. et al., Identification and Optimization of PDE10A Inhibitors Using Fragment-Based Screening by Nanocalorimetry and X-ray Crystallography. J Biomol Screen (2014)

Release Date

2014-02-26

Peptides

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A

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