SMTL ID : 4lm5.1

Crystal structure of Pim1 in complex with 2-{4-[(3-aminopropyl)amino]quinazolin-2-yl}phenol (resulting from displacement of SKF86002)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x Q17: 2-{4-[(3-aminopropyl)amino]quinazolin-2-yl}phenol(Non-covalent)

Q17.1: 15 residues within 4Å: Chain A: L.17, F.22, V.25, A.38, K.40, E.62, L.93, E.94, R.95, D.101, E.144, L.147, I.158, D.159 Ligands: GOL.4 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.17, A:F.22, A:F.22, A:F.22, A:V.25, A:A.38, A:K.40, A:R.95, A:L.147, A:D.159 Hydrogen bonds: A:E.144 Water bridges: A:D.159

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: F.103, I.106, D.143, D.207, G.211, D.212 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.143, A:D.143 GOL.3: 3 residues within 4Å: Chain A: R.129, N.133, F.254 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.129, A:R.129 Water bridges: A:E.255 GOL.4: 5 residues within 4Å: Chain A: L.17, Q.100, D.101, D.104 Ligands: Q17.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.101, A:D.101

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Parker, L.J. et al., Kinase crystal identification and ATP-competitive inhibitor screening using the fluorescent ligand SKF86002. Acta Crystallogr.,Sect.D (2014)

Release Date

2014-02-12

Peptides

Serine/threonine-protein kinase pim-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase pim-1

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