SMTL ID : 4lok.1

Crystal structure of mSting in complex with c[G(3',5')pA(3',5')p]

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

homo-dimer

Ligands

1 x 1YD: 2-amino-9-[(2R,3R,3aR,5S,7aS,9R,10R,10aR,12R,14aS)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one(Non-covalent)

1YD.1: 22 residues within 4Å: Chain A: S.9, Y.10, G.13, Y.14, R.85, V.86, Y.87, S.88, E.107, T.110, P.111 Chain B: S.9, Y.10, G.13, Y.14, I.82, R.85, V.86, Y.87, S.88, T.110, P.111 24 PLIP interactions: 8 interactions with chain B, 16 interactions with chain A Hydrogen bonds: B:R.85, B:V.86, B:S.88, B:T.110, B:T.110, A:S.9, A:R.85, A:S.88, A:S.88, A:T.110, A:T.114 Salt bridges: B:R.85, A:R.85, A:E.107 pi-Cation interactions: B:R.85, B:R.85, A:R.85, A:R.85 Water bridges: A:R.79, A:R.79, A:S.88, A:S.88, A:T.110, A:T.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gao, P. et al., Structure-Function Analysis of STING Activation by c[G(2',5')pA(3',5')p] and Targeting by Antiviral DMXAA. Cell(Cambridge,Mass.) (2013)

Release Date

2013-08-14

Peptides

Stimulator of interferon genes protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Stimulator of interferon genes protein

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