SMTL ID : 4lqf.1

Structure of murine IgG2b A2C7-Fab in complex with vaccinia antigen A33R at the resolution of 2.3 Angstroms

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-2-2-2-mer

Ligands

8 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain A: H.25, E.41 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.25, A:E.41, A:E.41 ZN.2: 3 residues within 4Å: Chain C: R.161, E.191, H.195 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:E.191, C:E.191, C:H.195 ZN.3: 3 residues within 4Å: Chain B: H.168 Chain C: N.144, D.173 3 PLIP interactions: 1 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:D.173, H2O.3, H2O.3 ZN.4: 1 residues within 4Å: Chain C: H.98 4 PLIP interactions: 1 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:H.98, H2O.3, H2O.3, H2O.3 ZN.5: 2 residues within 4Å: Chain D: H.25, E.41 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:H.25, D:E.41, D:E.41 ZN.6: 3 residues within 4Å: Chain F: R.161, E.191, H.195 3 PLIP interactions: 3 interactions with chain F Metal complexes: F:E.191, F:E.191, F:H.195 ZN.7: 3 residues within 4Å: Chain E: H.168 Chain F: N.144, D.173 3 PLIP interactions: 1 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:D.173, H2O.6, H2O.6 ZN.8: 1 residues within 4Å: Chain F: H.98 4 PLIP interactions: 1 interactions with chain F, 3 Ligand-Water interactions Metal complexes: F:H.98, H2O.6, H2O.6, H2O.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matho, M.H. et al., Structural and Functional Characterization of Anti-A33 Antibodies Reveal a Potent Cross-Species Orthopoxviruses Neutralizer. Plos Pathog. (2015)

Release Date

2014-08-06

Peptides

A33R: AD
Murine IgG2b A2C7 Heavy chain Fab domain: BE
Murine IgG2b A2C7 Light chain Fab domain: CF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
A

B
H

E
H

C
L

F
L

A33R

Murine IgG2b A2C7 Heavy chain Fab domain

Murine IgG2b A2C7 Light chain Fab domain

Related Entries With Identical Sequence