- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.50 Å
- Oligo State
- hetero-oligomer
- Ligands
- 2 x PYR: PYRUVIC ACID(Non-covalent)
- 4 x NA: SODIUM ION(Non-functional Binders)
NA.2: 4 residues within 4Å:- Chain A: V.180, L.181, S.182
- Chain C: Q.221
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain C- Hydrogen bonds: A:V.180, A:S.182, C:Q.221
- Water bridges: A:D.183
NA.5: 3 residues within 4Å:- Chain B: K.98, L.101, A.102
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:A.102
NA.6: 3 residues within 4Å:- Chain B: I.173, N.296
- Ligands: COA.8
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:N.296
- Water bridges: B:T.182
NA.14: 3 residues within 4Å:- Chain D: I.173, N.296
- Ligands: COA.15
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:N.296
- 2 x MG: MAGNESIUM ION(Non-covalent)
MG.3: 4 residues within 4Å:- Chain A: D.22, H.204, H.206
- Ligands: PYR.1
4 PLIP interactions:3 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:D.22, A:H.204, A:H.206, H2O.2
MG.12: 4 residues within 4Å:- Chain C: D.22, H.204, H.206
- Ligands: PYR.9
4 PLIP interactions:3 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:D.22, C:H.204, C:H.206, H2O.29
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 3 residues within 4Å:- Chain B: R.268, D.269, I.270
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:D.269, B:I.270
- Water bridges: B:P.267, B:R.268, B:D.269
- Salt bridges: B:R.268
SO4.13: 2 residues within 4Å:- Chain D: A.247, R.251
3 PLIP interactions:3 interactions with chain D- Water bridges: D:R.251, D:R.251
- Salt bridges: D:R.251
- 3 x GOL: GLYCEROL(Non-functional Binders)
GOL.7: 2 residues within 4Å:- Chain B: A.108, P.139
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:A.108
- Water bridges: B:A.108
GOL.10: 3 residues within 4Å:- Chain C: I.161, D.164, A.165
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:I.161, C:D.164
GOL.11: 4 residues within 4Å:- Chain C: A.306, P.312, A.313, H.314
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:A.313, C:H.314, C:H.314
- Water bridges: C:R.284, C:R.284
- 2 x COA: COENZYME A(Non-covalent)
COA.8: 22 residues within 4Å:- Chain B: V.29, G.30, P.31, G.32, N.33, I.34, V.54, G.55, V.56, S.60, A.94, T.95, S.96, A.99, T.118, P.119, C.146, G.181, T.182, N.296, L.297
- Ligands: NA.6
17 PLIP interactions:17 interactions with chain B- Hydrophobic interactions: B:I.34, B:T.118
- Hydrogen bonds: B:P.31, B:N.33, B:N.33, B:I.34, B:T.182, B:T.182
- Water bridges: B:G.32, B:G.35, B:E.61, B:G.62, B:A.97, B:K.98, B:N.103, B:T.182, B:T.182
COA.15: 23 residues within 4Å:- Chain D: V.29, G.30, P.31, G.32, N.33, I.34, V.54, G.55, V.56, S.60, A.94, T.95, S.96, A.99, L.117, T.118, P.119, C.146, G.181, T.182, N.296, L.297
- Ligands: NA.14
16 PLIP interactions:16 interactions with chain D- Hydrophobic interactions: D:I.34, D:T.118
- Hydrogen bonds: D:P.31, D:N.33, D:N.33, D:I.34, D:T.182
- Water bridges: D:G.32, D:N.33, D:G.35, D:T.95, D:A.97, D:N.103, D:N.103, D:T.182, D:T.182
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Fischer, B. et al., Crystal and solution structures of the bifunctional enzyme (Aldolase/Aldehyde dehydrogenase) from Thermomonospora curvata, reveal a cofactor-binding domain motion during NAD+ and CoA accommodation whithin the shared cofactor-binding site. To be Published
- Release Date
- 2013-09-04
- Peptides
- 4-hydroxy-2-oxovalerate aldolase: AC
Acetaldehyde dehydrogenase: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CB
BD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.50 Å
- Oligo State
- hetero-oligomer
- Ligands
- 2 x PYR: PYRUVIC ACID(Non-covalent)
- 4 x NA: SODIUM ION(Non-functional Binders)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- 3 x GOL: GLYCEROL(Non-functional Binders)
- 2 x COA: COENZYME A(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Fischer, B. et al., Crystal and solution structures of the bifunctional enzyme (Aldolase/Aldehyde dehydrogenase) from Thermomonospora curvata, reveal a cofactor-binding domain motion during NAD+ and CoA accommodation whithin the shared cofactor-binding site. To be Published
- Release Date
- 2013-09-04
- Peptides
- 4-hydroxy-2-oxovalerate aldolase: AC
Acetaldehyde dehydrogenase: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CB
BD
D