SMTL ID : 4lsa.1

Crystal structure of BRI1 sud1 (Gly643Glu) bound to brassinolide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

3 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG-BMA-MAN.1: 8 residues within 4Å: Chain A: S.107, R.108, F.129, N.131, S.133, V.154, D.156, H.181 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA-MAN.2: 12 residues within 4Å: Chain A: A.159, G.186, S.207, S.208, S.230, L.250, N.252, S.254, S.255, Y.272, S.274, E.277 1 PLIP interactions: 1 interactions with chain A Water bridges: A:S.185 NAG-NAG-BMA-MAN.3: 9 residues within 4Å: Chain A: N.522, T.546, E.585, H.587, S.607, T.608, R.609, N.610, P.611 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.607

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 2 residues within 4Å: Chain A: N.89, G.90 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.89 NAG.5: 3 residues within 4Å: Chain A: K.188, S.190, N.210 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:K.188 Hydrogen bonds: A:N.210 NAG.6: 3 residues within 4Å: Chain A: N.328, S.330, E.353 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.328, A:N.328 NAG.7: 3 residues within 4Å: Chain A: N.528, N.550, G.551 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.528, A:N.550

1 x BLD: Brassinolide(Non-covalent)

BLD.8: 17 residues within 4Å: Chain A: I.517, I.540, W.541, Y.574, Y.576, K.578, L.592, Y.619, T.623, S.624, P.625, M.634, F.658, I.659, N.682, I.683, T.706 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.517, A:I.540, A:W.541, A:W.541, A:Y.576, A:F.658, A:F.658 Hydrogen bonds: A:H.622, A:S.624, A:T.706 Salt bridges: A:K.578

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Santiago, J. et al., Molecular mechanism for plant steroid receptor activation by somatic embryogenesis co-receptor kinases. Science (2013)

Release Date

2013-09-04

Peptides

Protein BRASSINOSTEROID INSENSITIVE 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein BRASSINOSTEROID INSENSITIVE 1

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