SMTL ID : 4luf.1

Crystal Structure of Ovine Serum Albumin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

3 x 2Q5: (2R)-2-{[(2R)-2-{[(2S)-2-{[(2R)-2-hydroxypropyl]oxy}propyl]oxy}propyl]oxy}propan-1-ol(Non-covalent)

2Q5.1: 9 residues within 4Å: Chain A: E.17, L.24, K.131, W.134, G.135, L.154, A.157, N.158, N.161 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:E.17, A:L.24, A:L.154, A:N.161 Hydrogen bonds: A:E.17 2Q5.2: 9 residues within 4Å: Chain A: A.212, D.323, L.326, L.330, L.346, A.349, K.350, V.481 Ligands: MLI.7 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:A.212, A:L.330, A:L.346, A:A.349 2Q5.3: 11 residues within 4Å: Chain A: Y.149, R.198, S.214, R.217, L.218, L.237, R.256, I.263, S.286, I.289, A.290 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.237, A:R.256, A:I.263 Hydrogen bonds: A:Y.149, A:R.198, A:R.256 Water bridges: A:W.213

1 x LMR: (2S)-2-hydroxybutanedioic acid(Non-covalent)

LMR.4: 8 residues within 4Å: Chain A: L.115, L.122, F.133, K.136, Y.137, F.164, M.184 Ligands: SIN.10 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.122 Hydrogen bonds: A:F.133 Salt bridges: A:K.136

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.5: 7 residues within 4Å: Chain A: A.26, H.67, F.70, G.247, D.248, L.249, L.250 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:A.26, A:F.70 Hydrogen bonds: A:L.249, A:L.250 Water bridges: A:E.251 Salt bridges: A:H.67

2 x MLI: MALONATE ION(Non-functional Binders)

MLI.6: 5 residues within 4Å: Chain A: L.304, Y.333, H.337, Y.340, K.377 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Y.333 Hydrogen bonds: A:Y.333, A:Y.340 Water bridges: A:L.304, A:L.304, A:L.304 Salt bridges: A:H.337, A:H.337, A:K.377 MLI.7: 6 residues within 4Å: Chain A: F.205, K.350, S.479, L.480, V.481 Ligands: 2Q5.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.480, A:V.481 Salt bridges: A:K.350

3 x SIN: SUCCINIC ACID(Non-covalent)

SIN.8: 7 residues within 4Å: Chain A: N.390, L.406, R.409, Y.410, K.413, L.452, S.488 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.410 Salt bridges: A:R.409, A:R.409, A:K.413 SIN.9: 4 residues within 4Å: Chain A: E.424, S.428, I.455, R.458 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.455 Hydrogen bonds: A:E.424, A:S.428 Salt bridges: A:R.458 SIN.10: 5 residues within 4Å: Chain A: Y.137, H.145, R.185, V.188 Ligands: LMR.4 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:R.185 Salt bridges: A:H.145, A:R.185

1 x FMT: FORMIC ACID(Non-functional Binders)

FMT.11: 3 residues within 4Å: Chain A: V.417, S.418, T.421 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.418

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bujacz, A. et al., Crystal structure of ovine serum albumin and its complex with 3,5-diiodosalicylic acid. To be Published

Release Date

2014-09-17

Peptides

Serum albumin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serum albumin

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