- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.41 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MN: MANGANESE (II) ION(Non-covalent)
- 2 x PA5: 5-PHOSPHOARABINONIC ACID(Non-covalent)
PA5.2: 16 residues within 4Å:- Chain A: Y.52, V.54, T.71, T.85, K.86, G.87, H.88, E.97, Y.99, H.136, F.148, A.150, Y.152, Y.160
- Ligands: MN.1, EDO.3
15 PLIP interactions:15 interactions with chain A- Hydrogen bonds: A:Y.52, A:T.85, A:K.86, A:G.87, A:Y.99, A:Y.160
- Water bridges: A:Y.52, A:T.71, A:H.136, A:T.138, A:A.150, A:Y.160
- Salt bridges: A:H.88, A:H.88, A:H.136
PA5.8: 16 residues within 4Å:- Chain B: Y.52, V.54, T.71, T.85, K.86, G.87, H.88, E.97, Y.99, H.136, F.148, A.150, Y.152, Y.160
- Ligands: MN.7, EDO.9
14 PLIP interactions:14 interactions with chain B- Hydrogen bonds: B:T.71, B:T.85, B:K.86, B:G.87
- Water bridges: B:Y.52, B:T.71, B:Y.99, B:H.136, B:T.138, B:A.150, B:Y.160
- Salt bridges: B:H.88, B:H.88, B:H.136
- 8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.3: 5 residues within 4Å:- Chain A: V.54, E.58, Y.152, H.158
- Ligands: PA5.2
1 PLIP interactions:1 interactions with chain A- Water bridges: A:H.158
EDO.4: 7 residues within 4Å:- Chain A: G.64, D.65, L.66, P.153
- Chain B: R.95, P.153
- Ligands: EDO.10
7 PLIP interactions:3 interactions with chain A, 4 interactions with chain B- Hydrogen bonds: A:G.64, A:D.65, A:A.154, B:R.95
- Water bridges: B:G.64, B:G.64, B:R.95
EDO.5: 3 residues within 4Å:- Chain A: R.25, K.86, Y.160
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Y.160
- Water bridges: A:Y.160
EDO.6: 3 residues within 4Å:- Chain A: Y.74, P.75, P.145
No protein-ligand interaction detected (PLIP)EDO.9: 5 residues within 4Å:- Chain B: V.54, E.58, Y.152, H.158
- Ligands: PA5.8
1 PLIP interactions:1 interactions with chain B- Water bridges: B:H.158
EDO.10: 7 residues within 4Å:- Chain A: R.95, P.153
- Chain B: G.64, D.65, L.66, P.153
- Ligands: EDO.4
7 PLIP interactions:3 interactions with chain B, 4 interactions with chain A- Hydrogen bonds: B:G.64, B:D.65, B:A.154, A:R.95
- Water bridges: A:G.64, A:G.64, A:R.95
EDO.11: 3 residues within 4Å:- Chain B: R.25, K.86, Y.160
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:Y.160
- Water bridges: B:Y.160
EDO.12: 3 residues within 4Å:- Chain B: Y.74, P.75, P.145
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Baker, P.J. et al., Correlated mutation analysis as a tool for smart library design to improve protein performance. To be Published
- Release Date
- 2014-07-30
- Peptides
- Glucose-6-phosphate isomerase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.41 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MN: MANGANESE (II) ION(Non-covalent)
- 2 x PA5: 5-PHOSPHOARABINONIC ACID(Non-covalent)
- 8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Baker, P.J. et al., Correlated mutation analysis as a tool for smart library design to improve protein performance. To be Published
- Release Date
- 2014-07-30
- Peptides
- Glucose-6-phosphate isomerase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A