SMTL ID : 4lw9.1 (11 other biounits)

Crystal structure of Vibrio cholera major pseudopilin EpsG

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain A: E.19, D.23 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.19, A:E.19, A:D.23, A:D.23 ZN.2: 3 residues within 4Å: Chain A: E.114, H.117, H.119 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.114, A:H.117, A:H.119 ZN.3: 2 residues within 4Å: Chain A: H.115, H.116 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.115, A:H.116

2 x NA: SODIUM ION(Non-functional Binders)

NA.4: 6 residues within 4Å: Chain A: K.80, G.81, I.83, D.84, N.105, W.106 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.83, A:N.105 NA.7: 1 residues within 4Å: Chain A: E.40 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.40

1 x CA: CALCIUM ION(Non-covalent)

CA.5: 6 residues within 4Å: Chain A: L.88, D.91, Q.93, G.95, G.100, D.102 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:L.88, A:Q.93, A:G.95, A:G.100, A:D.102

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.6: 1 residues within 4Å: Chain A: H.118 Ligand excluded by PLIP

1 x PT: PLATINUM (II) ION(Non-covalent)

PT.8: 1 residues within 4Å: Chain A: M.24 No protein-ligand interaction detected (PLIP)

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.9: 3 residues within 4Å: Chain A: L.113, E.114, H.115 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.115 Water bridges: A:E.114, A:E.114 Salt bridges: A:H.115

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vago, F.S. et al., Crystal structure of Vibrio cholera major pseudopilin EpsG. To be Published

Release Date

2014-07-16

Peptides

Type II secretion system protein G: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Type II secretion system protein G

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