SMTL ID : 4m2a.1

Crystal structure of the udp-glucose pyrophosphorylase from Leishmania major in the post-reactive state

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.66 Å

Oligo State

monomer

Ligands

1 x UPG: URIDINE-5'-DIPHOSPHATE-GLUCOSE(Non-covalent)

UPG.1: 24 residues within 4Å: Chain A: L.81, N.82, G.83, G.84, M.130, Q.162, P.188, G.190, H.191, N.219, G.220, D.221, G.256, G.257, L.282, E.284, F.305, N.306, T.307, N.308, F.376, P.378, K.380 Ligands: MG.2 23 PLIP interactions: 23 interactions with chain A Hydrogen bonds: A:N.82, A:G.83, A:G.84, A:Q.162, A:Q.162, A:G.190, A:H.191, A:N.219, A:G.220, A:G.257, A:G.257, A:E.284, A:N.306, A:K.380 Water bridges: A:D.221, A:N.308, A:N.308, A:K.380 Salt bridges: A:H.191, A:H.191, A:K.380, A:K.380, A:K.380

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: G.84, L.85 Ligands: UPG.1, SO4.3 No protein-ligand interaction detected (PLIP)

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 5 residues within 4Å: Chain A: G.84, L.85, G.86, T.87 Ligands: MG.2 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:L.85, A:T.87, A:T.87 Water bridges: A:G.88, A:G.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fuehring, J. et al., Catalytic Mechanism and Allosteric Regulation of Udp-Glucose Pyrophosphorylase from Leishmania Major. ACS CATALYSIS (2013)

Release Date

2014-01-29

Peptides

UDP-glucose pyrophosphorylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UDP-glucose pyrophosphorylase

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