- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.85 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
MG.1: 4 residues within 4Å:- Chain A: D.44, E.110
- Chain D: G.27
- Ligands: C5P.5
5 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions, 1 Ligand-Ligand interactions- Metal complexes: A:D.44, A:E.110, H2O.1, H2O.1, C5P.5
MG.2: 4 residues within 4Å:- Chain B: D.44, E.110
- Chain C: G.27
- Ligands: C5P.8
5 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions, 1 Ligand-Ligand interactions- Metal complexes: B:D.44, B:E.110, H2O.1, H2O.1, C5P.8
MG.3: 3 residues within 4Å:- Chain A: E.40
- Chain B: E.64
- Chain C: A.1
No protein-ligand interaction detected (PLIP)MG.4: 2 residues within 4Å:- Chain C: A.1, A.2
No protein-ligand interaction detected (PLIP)MG.6: 4 residues within 4Å:- Chain A: E.64
- Chain B: D.107
- Chain D: A.1
- Ligands: C5P.8
No protein-ligand interaction detected (PLIP)MG.7: 2 residues within 4Å:- Chain D: A.1, A.2
No protein-ligand interaction detected (PLIP)- 2 x C5P: CYTIDINE-5'-MONOPHOSPHATE(Non-covalent)
C5P.5: 12 residues within 4Å:- Chain A: E.40, F.41, D.44, E.110
- Chain B: E.64, S.68, K.71
- Chain C: A.1, G.25, C.26
- Chain D: G.27
- Ligands: MG.1
7 PLIP interactions:2 interactions with chain A, 5 interactions with chain B- Hydrogen bonds: A:E.110, B:E.64, B:E.64, B:S.68, B:S.68, B:K.71
- Water bridges: A:N.48
C5P.8: 13 residues within 4Å:- Chain A: E.64, S.68, K.71
- Chain B: E.40, F.41, D.44, E.110
- Chain C: G.27
- Chain D: A.1, G.25, C.26
- Ligands: MG.2, MG.6
6 PLIP interactions:4 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:E.64, A:S.68, A:S.68, A:K.71
- Water bridges: B:N.48, B:E.110
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Court, D.L. et al., RNase III: Genetics and Function; Structure and Mechanism. Annu. Rev. Genet. (2013)
- Release Date
- 2013-12-11
- Peptides
- Ribonuclease 3: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.85 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
- 2 x C5P: CYTIDINE-5'-MONOPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Court, D.L. et al., RNase III: Genetics and Function; Structure and Mechanism. Annu. Rev. Genet. (2013)
- Release Date
- 2013-12-11
- Peptides
- Ribonuclease 3: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B