SMTL ID : 4m3d.1

Rapid and efficient design of new inhibitors of Mycobacterium tuberculosis transcriptional repressor EthR using fragment growing, merging and linking approaches

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x 2H2: 4-{3-[(phenylsulfonyl)amino]prop-1-yn-1-yl}-N-(3,3,3-trifluoropropyl)benzamide(Non-covalent)

2H2.1: 19 residues within 4Å: Chain A: L.90, M.102, W.103, G.106, I.107, F.110, F.114, W.138, M.142, W.145, Y.148, T.149, V.152, N.176, N.179, E.180, L.183, F.184, W.207 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:M.102, A:W.103, A:W.103, A:W.103, A:I.107, A:F.110, A:F.110, A:F.110, A:W.145, A:Y.148, A:V.152, A:W.207 Hydrogen bonds: A:G.106, A:Y.148, A:Y.148, A:N.176, A:N.179 2H2.2: 19 residues within 4Å: Chain B: L.90, M.102, W.103, G.106, I.107, F.110, F.114, W.138, M.142, W.145, Y.148, T.149, V.152, N.176, N.179, E.180, L.183, F.184, W.207 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:M.102, B:W.103, B:W.103, B:W.103, B:I.107, B:F.110, B:F.110, B:F.110, B:W.145, B:Y.148, B:V.152, B:W.207 Hydrogen bonds: B:G.106, B:Y.148, B:N.176, B:N.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Villemagne, B. et al., Ligand Efficiency Driven Design of New Inhibitors of Mycobacterium tuberculosis Transcriptional Repressor EthR Using Fragment Growing, Merging, and Linking Approaches. J.Med.Chem. (2014)

Release Date

2014-06-25

Peptides

HTH-type transcriptional regulator EthR: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

HTH-type transcriptional regulator EthR

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