- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x MN: MANGANESE (II) ION(Non-covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 4 residues within 4Å:- Chain A: I.67, E.68, T.69, N.70
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:T.69, A:N.70, A:N.70
- Water bridges: A:E.68
SO4.12: 4 residues within 4Å:- Chain B: I.67, E.68, T.69, N.70
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:T.69, B:N.70, B:N.70
- 2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.5: 7 residues within 4Å:- Chain A: N.70, K.71, A.74, R.161, S.231, E.232
- Ligands: X48.6
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:R.161, A:R.161, A:S.231
- Water bridges: A:E.232, A:E.232
EDO.13: 7 residues within 4Å:- Chain B: N.70, K.71, A.74, R.161, S.231, E.232
- Ligands: X48.14
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:R.161, B:R.161, B:S.231
- Water bridges: B:E.232, B:E.232
- 6 x X48: 3-hydroxy-6-phenylpyridin-2(5H)-one(Non-covalent)
X48.6: 13 residues within 4Å:- Chain A: K.71, A.74, I.75, H.78, E.117, D.145, E.156, I.157, K.171
- Ligands: MN.1, MN.2, EDO.5, X48.8
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:K.71, A:A.74, A:I.75
- Hydrogen bonds: A:K.171
- Water bridges: A:Y.167, A:Y.167
- pi-Cation interactions: A:H.78
X48.7: 10 residues within 4Å:- Chain A: K.56, A.57, E.60, Y.61, E.117, G.118, R.119, D.120
- Ligands: MN.3, X48.8
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:K.56, A:K.56, A:E.60, A:Y.61, A:D.120
- Hydrogen bonds: A:G.118
- Water bridges: A:A.57, A:A.57, A:R.119
X48.8: 10 residues within 4Å:- Chain A: A.57, Y.61, E.63, K.71, I.75, E.117
- Ligands: MN.2, MN.3, X48.6, X48.7
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:Y.61, A:E.63, A:K.71, A:I.75
- pi-Stacking: A:Y.61
X48.14: 13 residues within 4Å:- Chain B: K.71, A.74, I.75, H.78, E.117, D.145, E.156, I.157, K.171
- Ligands: MN.9, MN.10, EDO.13, X48.16
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:K.71, B:A.74, B:I.75
- Hydrogen bonds: B:Y.167, B:K.171
- pi-Cation interactions: B:H.78
X48.15: 10 residues within 4Å:- Chain B: K.56, A.57, E.60, Y.61, E.117, G.118, R.119, D.120
- Ligands: MN.11, X48.16
10 PLIP interactions:10 interactions with chain B- Hydrophobic interactions: B:K.56, B:K.56, B:E.60, B:Y.61, B:D.120
- Hydrogen bonds: B:Y.61, B:G.118
- Water bridges: B:A.57, B:A.57, B:R.119
X48.16: 10 residues within 4Å:- Chain B: A.57, Y.61, E.63, K.71, I.75, E.117
- Ligands: MN.10, MN.11, X48.14, X48.15
7 PLIP interactions:7 interactions with chain B- Hydrophobic interactions: B:Y.61, B:E.63, B:K.71, B:I.75
- Hydrogen bonds: B:Y.61, B:E.117
- pi-Stacking: B:Y.61
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bauman, J.D. et al., Crystallographic fragment screening and structure-based optimization yields a new class of influenza endonuclease inhibitors. Acs Chem.Biol. (2013)
- Release Date
- 2013-09-18
- Peptides
- Polymerase PA: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x MN: MANGANESE (II) ION(Non-covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- 2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 6 x X48: 3-hydroxy-6-phenylpyridin-2(5H)-one(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bauman, J.D. et al., Crystallographic fragment screening and structure-based optimization yields a new class of influenza endonuclease inhibitors. Acs Chem.Biol. (2013)
- Release Date
- 2013-09-18
- Peptides
- Polymerase PA: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A