SMTL ID : 4m69.1

Crystal structure of the mouse RIP3-MLKL complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.1: 22 residues within 4Å: Chain A: V.28, G.29, K.30, G.31, G.32, F.33, G.34, V.36, A.49, K.51, T.95, R.96, F.97, M.98, S.102, D.143, K.145, S.147, N.148, L.150, D.161 Ligands: MG.3 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:G.31, A:G.32, A:F.33, A:K.51, A:R.96, A:M.98, A:S.102, A:D.143, A:D.143, A:K.145, A:S.147, A:S.147, A:S.147 Water bridges: A:T.95, A:D.143, A:D.143, A:K.145 Salt bridges: A:K.51

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain A: R.69, N.70, E.71, V.73, L.75, K.158 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.70, A:E.71, A:E.71, A:V.73, A:L.75 Salt bridges: A:R.69, A:K.158 SO4.6: 3 residues within 4Å: Chain B: L.116, R.120, R.123 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:R.120, B:R.123

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 5 residues within 4Å: Chain A: K.51, S.147, N.148, D.161 Ligands: ANP.1 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.161, H2O.4

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 4 residues within 4Å: Chain A: K.24, Q.84, W.85, D.86 Ligand excluded by PLIP CL.5: 2 residues within 4Å: Chain A: K.23, R.42 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xie, T. et al., Structural Insights into RIP3-Mediated Necroptotic Signaling. Cell Rep (2013)

Release Date

2013-10-16

Peptides

Receptor-interacting serine/threonine-protein kinase 3: A
Mixed lineage kinase domain-like protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Receptor-interacting serine/threonine-protein kinase 3

Mixed lineage kinase domain-like protein

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