SMTL ID : 4m7a.3 (2 other biounits)

Crystal structure of Lsm2-8 complex bound to the 3' end sequence of U6 snRNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.78 Å

Oligo State

hetero-2-2-2-2-2-2-2-mer

Ligands

2 x G- U- U- U- U: U6 snRNA(Non-covalent)

G-U-U-U-U.1: 26 residues within 4Å: Chain H: N.33, T.34, N.35, R.57, G.58, S.59 Chain I: F.35, N.37, R.63, G.64, S.65 Chain J: H.36, N.38, R.69, G.70, D.71 Chain K: R.74, T.76 Chain M: Q.57, T.97 Chain N: W.35, N.37, Y.70, R.72, G.73, T.74 Protein-ligand interaction information (PLIP) not available G-U-U-U-U.2: 27 residues within 4Å: Chain A: K.32, N.33, T.34, N.35, R.57, G.58, S.59 Chain B: F.35, N.37, R.63, G.64, S.65 Chain C: H.36, N.38, R.69, G.70, D.71 Chain D: R.74, T.76 Chain F: Q.57, L.58, T.97 Chain G: W.35, N.37, R.72, G.73, T.74 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, L. et al., Crystal structures of the Lsm complex bound to the 3' end sequence of U6 small nuclear RNA. Nature (2014)

Release Date

2013-11-13

Peptides

U6 snRNA-associated Sm-like protein LSm8: AH
U6 snRNA-associated Sm-like protein LSm2: BI
U6 snRNA-associated Sm-like protein LSm3: CJ
U6 snRNA-associated Sm-like protein LSm6: DK
U6 snRNA-associated Sm-like protein LSm5: EL
U6 snRNA-associated Sm-like protein LSm7: FM
U6 snRNA-associated Sm-like protein LSm4: GN

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

H
H

B
B

I
I

C
C

J
J

D
D

K
K

E
E

L
L

F
F

M
M

G
G

N
N

U6 snRNA-associated Sm-like protein LSm8

U6 snRNA-associated Sm-like protein LSm2

U6 snRNA-associated Sm-like protein LSm3

U6 snRNA-associated Sm-like protein LSm6

U6 snRNA-associated Sm-like protein LSm5

U6 snRNA-associated Sm-like protein LSm7

U6 snRNA-associated Sm-like protein LSm4

Related Entries With Identical Sequence