SMTL ID : 4m7v.1

Dihydrofolate reductase from Enterococcus faecalis complexed with NADP(H)and RAB-propyl

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x RAR: 5-(3,4-dimethoxy-5-{(1E)-3-oxo-3-[(1S)-1-propylphthalazin-2(1H)-yl]prop-1-en-1-yl}benzyl)pyrimidine-2,4-diamine(Non-covalent)

RAR.1: 16 residues within 4Å: Chain A: I.13, W.14, A.15, G.26, L.28, D.35, L.36, F.39, K.40, M.58, L.63, P.64, R.66, G.105, T.124 Ligands: NAP.2 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.28, A:L.36, A:L.36, A:F.39, A:F.39, A:K.40, A:L.63, A:P.64 Hydrogen bonds: A:I.13, A:W.14, A:T.124 Water bridges: A:L.28 Salt bridges: A:D.35 pi-Stacking: A:F.39

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.2: 30 residues within 4Å: Chain A: W.14, A.15, I.22, G.23, K.24, E.25, G.26, K.27, L.28, W.30, G.51, R.52, A.53, T.54, L.71, T.72, S.73, H.86, S.87, V.88, G.105, G.106, G.107, S.108, V.109, V.110, F.111, E.113, T.134 Ligands: RAR.1 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:I.22, A:F.111 Hydrogen bonds: A:A.15, A:I.22, A:G.26, A:G.26, A:G.51, A:R.52, A:R.52, A:A.53, A:T.54, A:T.72, A:S.73, A:V.88, A:G.107, A:S.108, A:V.109, A:V.110, A:E.113, A:T.134, A:T.134 Salt bridges: A:R.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bourne, C.R. et al., The Structure and Competitive Substrate Inhibition of Dihydrofolate Reductase from Enterococcus faecalis Reveal Restrictions to Cofactor Docking. Biochemistry (2014)

Release Date

2014-03-05

Peptides

Dihydrofolate reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dihydrofolate reductase