SMTL ID : 4m8u.1

The Structure of MalL mutant enzyme V200A from Bacillus subtilus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

monomer

Ligands

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1: 11 residues within 4Å: Chain A: D.59, Y.62, V.99, H.102, F.144, F.163, Q.167, D.199, E.255, R.418 Ligands: GOL.2 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:H.102, A:Q.167, A:D.199, A:E.255, A:R.418, A:R.418 Water bridges: A:R.197, A:R.197

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: F.163, E.255, F.281, K.296, D.332, E.389, R.418 Ligands: TRS.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.332, A:E.389, A:R.418 GOL.4: 6 residues within 4Å: Chain A: D.343, R.344, R.347, K.348, R.447, D.450 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.343, A:R.347, A:R.447 Water bridges: A:K.345, A:K.348, A:K.348, A:D.450 GOL.5: 7 residues within 4Å: Chain A: S.142, I.143, P.293, N.294, W.297, A.393, L.397 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.143, A:P.293, A:W.297 GOL.6: 8 residues within 4Å: Chain A: H.283, M.311, W.314, Q.315, N.324, T.325, L.326, Y.327 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Q.315, A:Y.327, A:Y.327 Water bridges: A:N.324, A:T.325, A:T.325, A:T.325

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 5 residues within 4Å: Chain A: D.20, N.22, D.24, F.26, D.28 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.20, A:D.24, A:F.26, A:D.28, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hobbs, J.K. et al., Change in heat capacity for enzyme catalysis determines temperature dependence of enzyme catalyzed rates. Acs Chem.Biol. (2013)

Release Date

2013-09-25

Peptides

Oligo-1,6-glucosidase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Oligo-1,6-glucosidase 1