SMTL ID : 4m99.1

Acetyltransferase domain of PglB from Neisseria gonorrhoeae FA1090 in complex with acetyl coenzyme A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-trimer

Ligands

3 x ACO: ACETYL COENZYME *A(Non-covalent)

ACO.1: 20 residues within 4Å: Chain A: D.137, H.138, S.155, G.156, R.173, Q.174, V.191, N.203, P.204, K.206 Chain B: N.131, S.149, P.150, R.165, G.167, T.168, G.185, A.186, A.201, G.202 15 PLIP interactions: 7 interactions with chain B, 8 interactions with chain A Hydrophobic interactions: B:P.150, A:D.137 Hydrogen bonds: B:S.149, B:R.165, B:T.168, B:A.186, B:A.186, B:G.202, A:S.155, A:S.155, A:G.156, A:R.173 Salt bridges: A:R.173, A:R.173, A:K.206 ACO.3: 18 residues within 4Å: Chain B: D.137, H.138, S.155, G.156, R.173, Q.174, V.191, N.203, P.204, K.206 Chain C: S.149, P.150, R.165, G.167, T.168, G.185, A.186, A.201 15 PLIP interactions: 6 interactions with chain C, 9 interactions with chain B Hydrogen bonds: C:S.149, C:R.165, C:T.168, C:A.186, C:A.186, C:G.202, B:S.155, B:G.156, B:R.173, B:Q.174, B:Q.174 Hydrophobic interactions: B:R.173 Water bridges: B:Q.174 Salt bridges: B:R.173, B:K.206 ACO.4: 21 residues within 4Å: Chain A: S.149, P.150, R.165, G.167, T.168, G.185, A.186, A.201, G.202, L.208 Chain C: D.137, H.138, S.155, G.156, R.173, Q.174, V.189, V.191, N.203, P.204, K.206 18 PLIP interactions: 7 interactions with chain A, 11 interactions with chain C Hydrophobic interactions: A:P.150, A:L.208, C:R.173 Hydrogen bonds: A:S.149, A:T.168, A:A.186, A:A.186, A:G.202, C:S.155, C:G.156, C:R.173, C:Q.174 Water bridges: C:Q.174, C:K.206, C:K.206 Salt bridges: C:R.173, C:R.173, C:K.206

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 3 residues within 4Å: Chain A: H.153 Chain B: H.153 Chain C: H.153 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.153

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Morrison, M.J. et al., Biochemical analysis and structure determination of bacterial acetyltransferases responsible for the biosynthesis of UDP-N,N'-diacetylbacillosamine. J.Biol.Chem. (2013)

Release Date

2013-10-02

Peptides

Pilin glycosylation protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Pilin glycosylation protein

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