SMTL ID : 4mav.1

Crystal structure of signaling protein SPB-40 complexed with 5-hydroxymethyl oxalanetriol at 2.80 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.79 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 5 residues within 4Å: Chain A: N.39, I.40, S.41, W.48, R.84 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:W.48 Hydrogen bonds: A:R.84 Water bridges: A:S.41, A:N.42

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: W.50, N.51, T.54, L.55 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.51 Water bridges: A:T.54, A:T.54

1 x RIB: alpha-D-ribofuranose(Non-covalent)

RIB.3: 5 residues within 4Å: Chain A: W.78, L.119, L.183, Y.185, W.330 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.185, A:W.330

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamini, S. et al., Crystal structure of signaling protein SPB-40 complexed with 5-hydroxymethyl oxalanetriol at 2.80 A resolution. To be Published

Release Date

2013-09-11

Peptides

Chitinase-3-like protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Chitinase-3-like protein 1

Related Entries With Identical Sequence