SMTL ID : 4may.1

Crystal structure of an immune complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-oligomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain B: R.79 Chain C: N.33, R.53, F.97 Chain D: R.10, D.122 5 PLIP interactions: 1 interactions with chain D, 3 interactions with chain C, 1 interactions with chain B Salt bridges: D:R.10, C:R.53, B:R.79 Hydrogen bonds: C:N.33, C:N.33

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sethi, D.K. et al., Crossreactivity of a human autoimmune TCR is dominated by a single TCR loop. Nat Commun (2013)

Release Date

2013-10-23

Peptides

MHC class II HLA-DQ-alpha chain: A
MHC class II antigen: B
HY.1B11 TCR alpha chain: C
UL15 peptide-HY.1B11 TCR beta chain, chimeric construct: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

MHC class II HLA-DQ-alpha chain

MHC class II antigen

HY.1B11 TCR alpha chain

UL15 peptide-HY.1B11 TCR beta chain, chimeric construct

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