SMTL ID : 4mgb.1

Crystal structure of hERa-LBD (Y537S) in complex with TCBPA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

hetero-2-2-mer

Ligands

2 x XDH: 4,4'-propane-2,2-diylbis(2,6-dichlorophenol)(Non-covalent)

XDH.1: 15 residues within 4Å: Chain A: L.49, T.50, L.52, A.53, E.56, L.87, L.90, M.91, L.94, F.107, I.127, F.128, G.224, H.227, L.228 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.49, A:A.53, A:L.87, A:L.228 Hydrogen bonds: A:E.56, A:R.97 Halogen bonds: A:G.224 XDH.2: 15 residues within 4Å: Chain B: L.49, L.52, A.53, E.56, L.90, M.91, L.94, F.107, M.124, I.127, F.128, G.224, H.227, L.228, M.231 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:L.49, B:A.53 Hydrogen bonds: B:H.227 Water bridges: B:E.56, B:R.97

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 3 residues within 4Å: Chain B: E.26, W.96, G.145 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:E.26, B:E.26 GOL.4: 8 residues within 4Å: Chain B: N.142, Q.144, E.147, L.192, M.193, A.196, L.198, R.206 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.142, B:L.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Delfosse, V. et al., Structural and functional profiling of environmental ligands for estrogen receptors. Environ.Health Perspect. (2014)

Release Date

2014-09-03

Peptides

Estrogen receptor: AB
Nuclear receptor coactivator 1: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Estrogen receptor

Nuclear receptor coactivator 1

Related Entries With Identical Sequence