SMTL ID : 4mi0.1

Human Enhancer of Zeste (Drosophila) Homolog 2(EZH2)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: C.47, C.61, C.69, C.82 Ligands: ZN.2, ZN.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.47, A:C.61, A:C.69, A:C.82 ZN.2: 6 residues within 4Å: Chain A: C.41, C.54, C.61, C.66 Ligands: ZN.1, ZN.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.41, A:C.54, A:C.61, A:C.66 ZN.3: 6 residues within 4Å: Chain A: C.41, C.43, C.47, C.52 Ligands: ZN.1, ZN.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.41, A:C.43, A:C.47, A:C.52 ZN.4: 6 residues within 4Å: Chain A: C.11, C.24, C.30, C.34 Ligands: ZN.5, ZN.6 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.11, A:C.24, A:C.30, A:C.34 ZN.5: 6 residues within 4Å: Chain A: C.4, H.6, C.11, C.15 Ligands: ZN.4, ZN.6 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.4, A:H.6, A:C.11, A:C.15 ZN.6: 6 residues within 4Å: Chain A: C.4, C.17, C.24, C.28 Ligands: ZN.4, ZN.5 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.4, A:C.17, A:C.24, A:C.28

4 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.7: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) UNX.8: 2 residues within 4Å: Chain A: N.163, K.164 No protein-ligand interaction detected (PLIP) UNX.9: 2 residues within 4Å: Chain A: Y.1, E.25 No protein-ligand interaction detected (PLIP) UNX.10: 1 residues within 4Å: Chain A: R.160 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, H. et al., Structure of the catalytic domain of EZH2 reveals conformational plasticity in cofactor and substrate binding sites and explains oncogenic mutations. Plos One (2013)

Release Date

2013-09-25

Peptides

Histone-lysine N-methyltransferase EZH2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone-lysine N-methyltransferase EZH2