SMTL ID : 4mi1.1

Crystal structure of the double mutant (S112A, H303A) of B.anthracis mycrocine immunity protein (MccF) with aspartyl sulfamoyl adenylates

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

homo-dimer

Ligands

2 x DSZ: 5'-O-(L-alpha-aspartylsulfamoyl)adenosine(Non-covalent)

DSZ.1: 16 residues within 4Å: Chain A: I.87, G.88, G.89, Y.114, A.115, D.116, P.140, F.180, W.183, N.213, N.215, T.216, K.242, E.272, A.306 Chain B: R.249 16 PLIP interactions: 15 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:G.88, A:G.89, A:D.116, A:T.216, A:K.242, A:K.242, A:E.272 Water bridges: A:D.178, A:N.213, A:N.213, A:E.272 Salt bridges: A:K.242, B:R.249 pi-Stacking: A:W.183, A:W.183, A:W.183 DSZ.2: 16 residues within 4Å: Chain A: R.249 Chain B: I.87, G.88, G.89, Y.114, A.115, D.116, P.140, F.180, W.183, N.213, N.215, T.216, K.242, E.272, A.306 19 PLIP interactions: 18 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:G.88, B:G.89, B:Y.114, B:D.116, B:T.216, B:T.216, B:K.242, B:K.242, B:E.272 Water bridges: B:D.178, B:N.213, B:N.213, B:E.272, B:H.308 Salt bridges: B:K.242, A:R.249 pi-Stacking: B:W.183, B:W.183, B:W.183

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 1 residues within 4Å: Chain B: S.1 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.1 Water bridges: B:S.1 SO4.4: 3 residues within 4Å: Chain B: E.179, F.180, Q.273 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:F.180, B:Q.273 SO4.5: 4 residues within 4Å: Chain B: N.202, G.203, Q.204, T.324 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Q.204, B:T.324 Water bridges: B:N.325

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nocek, B. et al., Crystal structure of the double mutant (S112A, H303A) of B.anthracis mycrocine immunity protein (MccF) with aspartyl sulfamoyl adenylates. TO BE PUBLISHED

Release Date

2014-04-23

Peptides

Microcin immunity protein MccF: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Microcin immunity protein MccF

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