SMTL ID : 4mi5.1

Crystal structure of the EZH2 SET domain

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: N.165, K.166 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.166 Water bridges: A:N.165, A:N.165, A:I.167

6 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain A: C.43, C.56, C.63, C.68 Ligands: ZN.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.43, A:C.56, A:C.63, A:C.68 ZN.3: 7 residues within 4Å: Chain A: C.43, C.45, C.49, C.54, C.63 Ligands: ZN.2, ZN.4 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.43, A:C.45, A:C.49, A:C.54 ZN.4: 5 residues within 4Å: Chain A: C.49, C.63, C.71, C.84 Ligands: ZN.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.49, A:C.63, A:C.71, A:C.84 ZN.5: 6 residues within 4Å: Chain A: C.6, C.19, C.26, C.30 Ligands: ZN.6, ZN.7 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.6, A:C.19, A:C.26, A:C.30 ZN.6: 6 residues within 4Å: Chain A: C.6, H.8, C.13, C.17 Ligands: ZN.5, ZN.7 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.6, A:H.8, A:C.13, A:C.17 ZN.7: 6 residues within 4Å: Chain A: C.13, C.26, C.32, C.36 Ligands: ZN.5, ZN.6 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.13, A:C.26, A:C.32, A:C.36

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Antonysamy, S. et al., Structural Context of Disease-Associated Mutations and Putative Mechanism of Autoinhibition Revealed by X-Ray Crystallographic Analysis of the EZH2-SET Domain. Plos One (2013)

Release Date

2014-01-08

Peptides

Histone-lysine N-methyltransferase EZH2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone-lysine N-methyltransferase EZH2